# hmmsearch :: search profile(s) against a sequence database # HMMER 3.0 (March 2010); http://hmmer.org/ # Copyright (C) 2010 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: Terpene_synth_N.hmm # target sequence database: Medicago-truncatula.faa # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: Terpene_synth_N-terminal [M=192] Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.3e-56 192.2 1.8 3.5e-56 191.6 1.3 1.3 1 XP_003618357.2 sesquiterpene synthase [Medicago truncatula] 9.5e-55 186.9 0.0 2.2e-54 185.8 0.0 1.7 1 XP_013447551.1 copalyldiphosphate synthase [Medicago truncat 3.3e-54 185.1 0.4 6.8e-54 184.1 0.3 1.5 1 XP_013456729.1 sesquiterpene synthase [Medicago truncatula] 4.6e-54 184.7 1.3 8.8e-54 183.8 0.9 1.5 1 XP_003614996.1 sesquiterpene synthase [Medicago truncatula] 6.3e-54 184.2 2.4 1.1e-53 183.4 1.7 1.4 1 XP_003615866.2 sesquiterpene synthase [Medicago truncatula] 1.3e-53 183.2 1.9 2.7e-53 182.2 1.3 1.5 1 XP_013451981.1 sesquiterpene synthase [Medicago truncatula] 3.7e-53 181.7 6.6 5.8e-53 181.1 4.6 1.3 1 XP_003596560.1 terpene synthase family, metal-binding domain 3.7e-53 181.7 0.7 7e-53 180.8 0.5 1.4 1 XP_003615860.2 sesquiterpene synthase [Medicago truncatula] 1.2e-52 180.1 2.3 2.1e-52 179.2 1.6 1.4 1 XP_013455658.1 sesquiterpene synthase [Medicago truncatula] 1.5e-52 179.8 2.3 3.1e-52 178.7 1.6 1.6 1 XP_013455657.1 sesquiterpene synthase [Medicago truncatula] 1.7e-52 179.5 6.2 2.7e-52 178.9 4.3 1.3 1 XP_003596557.1 terpene synthase family, metal-binding domain 1.7e-52 179.5 3.2 1.7e-52 179.5 2.2 1.6 1 XP_013443915.1 terpene synthase family, metal-binding domain 1.9e-52 179.4 1.9 1.9e-52 179.4 1.3 1.6 1 XP_013455551.1 (E)-beta-ocimene/myrcene synthase [Medicago t 2.4e-52 179.1 1.4 4.7e-52 178.1 0.9 1.5 1 XP_013460258.1 sesquiterpene synthase [Medicago truncatula] 6.8e-52 177.6 4.0 1.3e-51 176.7 2.8 1.5 1 XP_013454913.1 terpene synthase family, metal-binding domain 1.1e-49 170.3 1.7 2.7e-49 169.1 0.0 2.3 2 XP_003621314.2 copalyldiphosphate synthase [Medicago truncat 3.5e-49 168.8 2.4 4e-49 168.6 0.0 2.3 2 XP_013449739.1 copalyldiphosphate synthase [Medicago truncat 4.6e-49 168.4 9.7 6.8e-49 167.8 6.7 1.3 1 XP_003596565.1 sesquiterpene synthase, putative [Medicago tr 4.2e-48 165.2 4.4 8.1e-48 164.3 3.1 1.5 1 XP_003628406.2 monoterpene synthase [Medicago truncatula] 1.1e-46 160.7 6.3 1.8e-46 159.9 3.7 1.8 2 XP_013464204.1 monoterpene synthase [Medicago truncatula] 2.5e-46 159.4 6.6 3.3e-46 159.0 3.7 1.8 2 XP_013464201.1 monoterpene synthase [Medicago truncatula] 6.7e-46 158.0 6.6 2.2e-45 156.4 4.1 2.1 2 XP_003596036.1 monoterpene synthase [Medicago truncatula] 1.2e-45 157.2 0.2 2.3e-45 156.3 0.1 1.5 1 XP_013459981.1 Ent-kaurene synthase [Medicago truncatula] 1.6e-45 156.8 3.8 9.5e-44 151.0 2.1 2.8 1 XP_003617711.2 sesquiterpene synthase [Medicago truncatula] 1.8e-45 156.7 0.2 4e-45 155.5 0.1 1.6 1 XP_003600343.2 Ent-kaurene synthase [Medicago truncatula] 3.1e-45 155.9 1.1 4.1e-45 155.5 0.1 1.7 1 XP_013459978.1 Ent-kaurene synthase [Medicago truncatula] 3.6e-45 155.7 1.4 4.2e-45 155.5 0.1 1.8 1 XP_013459980.1 Ent-kaurene synthase [Medicago truncatula] 3.7e-45 155.6 1.4 4.4e-45 155.4 0.1 1.8 1 XP_013459979.1 Ent-kaurene synthase [Medicago truncatula] 6.6e-45 154.8 0.1 1.8e-44 153.4 0.0 1.8 1 XP_013464190.1 Ent-kaurene synthase [Medicago truncatula] 2.2e-39 136.8 3.5 3.9e-39 136.0 2.4 1.3 1 XP_013457144.1 (3S)-linalool/(E)-nerolidol/(E,E)-geranyl lin 3.8e-39 136.0 0.1 1e-38 134.6 0.0 1.7 1 XP_003597053.1 sesquiterpene synthase [Medicago truncatula] 1.6e-37 130.7 0.8 3.1e-37 129.8 0.6 1.5 1 XP_013457143.1 (3S)-linalool/(E)-nerolidol/(E,E)-geranyl lin 6.8e-37 128.7 2.1 8.8e-37 128.3 0.7 1.8 1 XP_003593502.1 (E)-nerolidol/(E,E)-geranyl linalool synthase 2e-36 127.1 0.0 4.5e-36 126.0 0.0 1.5 1 XP_003597054.1 sesquiterpene synthase [Medicago truncatula] 3.1e-36 126.5 1.0 1e-35 124.8 0.1 2.0 2 XP_003612878.2 copalyldiphosphate synthase [Medicago truncat 1.6e-35 124.2 2.5 2e-35 123.9 0.8 1.9 1 XP_003593505.2 (E)-nerolidol/(E,E)-geranyl linalool synthase 1.1e-34 121.5 3.7 2e-34 120.6 2.6 1.4 1 XP_003593394.2 (3S)-linalool/(E)-nerolidol/(E,E)-geranyl lin 2.2e-34 120.5 4.2 4.4e-34 119.5 2.9 1.5 1 XP_003621227.1 (E)-beta-ocimene/myrcene synthase [Medicago t 2.2e-32 114.0 6.0 5.6e-29 102.9 4.2 2.4 1 XP_003596564.2 terpene synthase family, metal-binding domain 4.7e-31 109.6 0.9 9.7e-31 108.6 0.6 1.5 1 XP_013460520.1 (3S)-linalool/(E)-nerolidol/(E,E)-geranyl lin 6.5e-31 109.2 7.1 8.2e-29 102.3 4.3 2.8 2 XP_013464203.1 monoterpene synthase [Medicago truncatula] 1e-30 108.5 0.7 1.7e-30 107.8 0.5 1.3 1 XP_013460519.1 (3S)-linalool/(E)-nerolidol/(E,E)-geranyl lin 1.9e-30 107.6 7.3 1.5e-28 101.5 4.3 2.8 2 XP_013464202.1 monoterpene synthase [Medicago truncatula] 2.2e-30 107.5 0.9 5e-30 106.3 0.6 1.6 1 XP_013460327.1 (3S)-linalool/(E)-nerolidol/(E,E)-geranyl lin 4.2e-30 106.5 1.9 9.4e-30 105.4 1.3 1.5 1 XP_013460518.1 (3S)-linalool/(E)-nerolidol/(E,E)-geranyl lin 1.1e-28 101.9 0.2 2.5e-28 100.7 0.1 1.6 1 XP_003600104.2 (3S)-linalool/(E)-nerolidol/(E,E)-geranyl lin 5e-28 99.7 0.6 1.1e-27 98.7 0.4 1.6 1 XP_013460516.1 (3S)-linalool/(E)-nerolidol/(E,E)-geranyl lin 2.6e-27 97.4 1.3 5.9e-27 96.3 0.9 1.5 1 XP_003619707.1 (3S)-linalool/(E)-nerolidol/(E,E)-geranyl lin 5.9e-14 53.8 0.2 8.8e-14 53.3 0.2 1.2 1 XP_003629125.2 amino-terminal domain terpene synthase [Medic 6.9e-12 47.1 0.7 1.2e-11 46.3 0.5 1.4 1 XP_003618358.2 sesquiterpene synthase [Medicago truncatula] 6.9e-06 27.5 0.1 1.3e-05 26.6 0.0 1.4 1 XP_003619712.1 (3S)-linalool/(E)-nerolidol/(E,E)-geranyl lin 1.9e-05 26.1 0.1 3.6e-05 25.2 0.1 1.4 1 XP_003616556.1 amino-terminal domain terpene synthase [Medic 5.2e-05 24.7 0.3 9.8e-05 23.8 0.2 1.4 1 XP_003608432.1 amino-terminal domain terpene synthase [Medic 7.1e-05 24.2 0.1 0.00012 23.5 0.0 1.4 1 XP_003617702.2 (E)-beta-caryophyllene synthase [Medicago tru 0.00056 21.3 0.1 0.00073 20.9 0.1 1.1 1 XP_003621226.1 amino-terminal domain terpene synthase [Medic ------ inclusion threshold ------ 0.12 13.7 0.2 0.37 12.1 0.0 1.8 2 XP_013443092.1 Ent-copalyl diphosphate synthase-like protein 0.21 12.9 0.1 0.49 11.7 0.0 1.6 2 XP_013448877.1 haloacid dehalogenase-like hydrolase [Medicag 0.3 12.4 0.0 0.75 11.1 0.0 1.7 1 XP_013448876.1 haloacid dehalogenase-like hydrolase [Medicag 0.52 11.6 0.0 1 10.6 0.0 1.5 1 XP_013455013.1 haloacid dehalogenase-like hydrolase [Medicag 0.59 11.4 0.0 1.2 10.4 0.0 1.5 1 XP_013455014.1 haloacid dehalogenase-like hydrolase [Medicag Domain annotation for each sequence (and alignments): >> XP_003618357.2 sesquiterpene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 191.6 1.3 3.6e-59 3.5e-56 1 192 [] 26 204 .. 26 204 .. 0.91 Alignments for each domain: == domain 1 score: 191.6 bits; conditional E-value: 3.6e-59 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrs 85 +wgd+f+ ++ ++s+ ++++ ++++lk+evr++++ +++ ++ +ek++lid++ rLG+syh+e+eI+e++++i++s XP_003618357.2 26 VWGDYFI-QYDSESVE-----LDQNISAQIDALKKEVRNMFNISKT---EKPSEKINLIDSICRLGVSYHYENEIDEVMQYIHKS 101 5******.78888843.....6688999*************64443...6777******************************** PP ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 86 weekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLk 170 + e+ + ed+l t ++ FrLLRq+G++vs++vF++Fkde+gnf+e+l +dv+g+lsLYeAsh++++geeiLe+al+Ft++hL XP_003618357.2 102 YVENGEITLEDNLCTLSVLFRLLRQQGFHVSPNVFNQFKDEQGNFSERLITDVEGMLSLYEASHMMVHGEEILEKALAFTSTHL- 185 ***96677777*************************************************************************. PP ---------------------- CS Terpene_synth_N-terminal 171 eslseelsdespnlaeeVehaL 192 es+ ++l sp la +V+h+L XP_003618357.2 186 ESIVTQL---SPFLAAQVKHSL 204 8888775...567*******97 PP >> XP_013447551.1 copalyldiphosphate synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 185.8 0.0 2.2e-57 2.2e-54 1 192 [] 287 493 .. 287 493 .. 0.87 Alignments for each domain: == domain 1 score: 185.8 bits; conditional E-value: 2.2e-57 --------------------------------......----------------------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaek......lkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiL 79 dw++ ++l+ ++gs++ sps+ta al+ ++++ l++ v+k +vp+vyp+dl+e+++l+d+L+rLGis++F++eIke++ XP_013447551.1 287 DWKQLLKLQSQDGSFLFSPSSTAFALM-QTKDenclkyLNNAVNKFNGGVPNVYPVDLFEHIWLVDRLERLGISRYFQQEIKECM 370 7**********************9999.56555998888888888888************************************* PP -----------------.....-----------------------------------------....------------------ CS Terpene_synth_N-terminal 80 deiyrsweekkseeeed.....dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsed....vkgllsLYeAshlstege 155 +++ r+w+ek + ++++ d++++A+aFrLLR hGy+vs dvFk+F+ +g+f ++++ + v+g+++LY+A+++ ++ge XP_013447551.1 371 NYVSRYWTEK-GICWARnsnvqDIDDTAMAFRLLRLHGYQVSADVFKHFER-NGEF-FCFAGQctqaVTGMYNLYRATQVLFPGE 452 ********96.44554455689***************************96.5556.5555444556****************** PP ----------------.--------..---.---------- CS Terpene_synth_N-terminal 156 eiLeealsFtrkhLke.slseelsd..esp.nlaeeVehaL 192 +iLe+a++F+ k+Lke + ++el d ++ nl +eV +aL XP_013447551.1 453 KILENAKHFSAKFLKEkREADELIDkwIIMkNLPDEVAYAL 493 ***************95555555445844459******998 PP >> XP_013456729.1 sesquiterpene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 184.1 0.3 7.1e-57 6.8e-54 1 192 [] 31 209 .. 31 209 .. 0.91 Alignments for each domain: == domain 1 score: 184.1 bits; conditional E-value: 7.1e-57 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrs 85 +wgd f++ + + + +++++++ lke+vr++l vp+v+ ++ +++ +lid++qrLG+ +hFe+eI e+L++i ++ XP_013456729.1 31 IWGDLFIQYVLEPME-------FDEIMKQIIMLKEKVRQML--VPNVNVTNPSREANLIDSIQRLGLYHHFEQEIGELLRHIDNN 106 699999964444443.......377888*************..8999999999******************************** PP ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 86 weekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLk 170 + e+ + ++dl+ +Al FrLLRq+Gy++ +dvFkkFk+e+gnfke+l dv+g+lsLYeA+h++++geeiL++alsFt+ hL XP_013456729.1 107 HVENGTITLNEDLHSIALVFRLLRQQGYHILPDVFKKFKNEQGNFKETLVGDVEGMLSLYEATHMRIHGEEILDDALSFTSLHL- 190 *9997778888*************************************************************************. PP ---------------------- CS Terpene_synth_N-terminal 171 eslseelsdespnlaeeVehaL 192 e ++++l sp++a++++h+L XP_013456729.1 191 EMMTTQL---SPSVATKINHSL 209 8788664...5679****9987 PP >> XP_003614996.1 sesquiterpene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 183.8 0.9 9.2e-57 8.8e-54 1 192 [] 23 200 .. 23 200 .. 0.90 Alignments for each domain: == domain 1 score: 183.8 bits; conditional E-value: 9.2e-57 -----------------------------------------------------.------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdle.ekLelidtLqrLGisyhFeeeIkeiLdeiyr 84 +wg++f+ ++ ++s+ + ++++ ++ +lk+evr++l + ++++ +kL lid++ rLG+syhFe+eI+e+L++i++ XP_003614996.1 23 VWGEYFI-QYASESM-----ELDQNIAAQIVTLKDEVRNMLL--S---KTEMPlAKLTLIDSICRLGVSYHFENEIDEVLQHIHN 96 5******.7888884.....35577888999**********3..2...244445******************************* PP ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 85 sweekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhL 169 s e+ + +d+l+ A+ Fr+LRq+G++vs++vF kFkdeegnf++ l++dv+g+lsLYeAsh+ ++geeiLeeal+Ft++hL XP_003614996.1 97 SCVENGEIILKDSLYSLAVLFRVLRQQGFYVSPNVFTKFKDEEGNFNKGLTTDVEGMLSLYEASHMIIHGEEILEEALAFTSTHL 181 *99985555667************************************************************************* PP ----------------------- CS Terpene_synth_N-terminal 170 keslseelsdespnlaeeVehaL 192 es+++++ s+ la +V++aL XP_003614996.1 182 -ESIATQM---SHFLAAQVKYAL 200 .9899775...345*******98 PP >> XP_003615866.2 sesquiterpene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 183.4 1.7 1.2e-56 1.1e-53 1 188 [. 20 199 .. 20 203 .. 0.87 Alignments for each domain: == domain 1 score: 183.4 bits; conditional E-value: 1.2e-56 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrs 85 +wgd+fl ++ ++s+ ++++++ ++e+lk++vrk+l +++ +++ ++++lid++ rLG+syhFe+eI+e+L++i+++ XP_003615866.2 20 VWGDYFL-RYASESM-----EHDQSIAAQIETLKNDVRKILD-IKN--IEKSLATVHLIDSICRLGVSYHFEKEIEEVLQHIHKN 95 5******.7888874.....46688888*************4.433..244559******************************* PP ----.-------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 86 week.kseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhL 169 + ++ + e++l A+ FrLLRq+G +vs+dvF+kFkde+gnf+e++ dv+gllsLYeA++l+++ge+iLeeal+Ft++hL XP_003615866.2 96 YVQNgEIIIFENNLCSLAVLFRLLRQQGLHVSPDVFNKFKDEDGNFSERIIGDVEGLLSLYEATQLMVHGEDILEEALAFTTTHL 180 **9875566677************************************************************************* PP -------------.------ CS Terpene_synth_N-terminal 170 keslseelsdesp.nlaeeV 188 +s++++ls+++ ++++ XP_003615866.2 181 -QSIANQLSNSHAiQVKNSL 199 .8899887443333444444 PP >> XP_013451981.1 sesquiterpene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 182.2 1.3 2.8e-56 2.7e-53 1 191 [. 23 199 .. 23 199 .. 0.90 Alignments for each domain: == domain 1 score: 182.2 bits; conditional E-value: 2.8e-56 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrs 85 +wg++f+ ++ ++s+ + ++++++++++lk evr++l + ++++ ++k++l+d++ rLG+syhFe+eI+++L+++++s XP_013451981.1 23 IWGEYFI-QYASESM-----ELDQNIVTQIDTLKSEVRNMLV-A---KTDEPFAKVKLVDSICRLGVSYHFEKEIDDVLQQVHKS 97 6******.7888884.....36688888*************3.2...246666******************************** PP ----.-------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 86 week.kseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhL 169 e+ + ed+l A+ Fr+LRq+G++vs++vF kFkd++gnf+e+l +dv+g+lsLYeAsh+ +++e+iLeeal Ft++hL XP_013451981.1 98 CVENgE-VILEDNLFSLAVLFRVLRQQGFYVSPNVFTKFKDKQGNFNETLITDVEGMLSLYEASHMIVHEEDILEEALGFTSTHL 181 999743.33456************************************************************************* PP ---------------------- CS Terpene_synth_N-terminal 170 keslseelsdespnlaeeVeha 191 es++++l +++lae+V++a XP_013451981.1 182 -ESIATQL---NHSLAEQVKYA 199 .9999886...235*****997 PP >> XP_003596560.1 terpene synthase family, metal-binding domain protein [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 181.1 4.6 6e-56 5.8e-53 1 192 [] 36 215 .. 36 215 .. 0.90 Alignments for each domain: == domain 1 score: 181.1 bits; conditional E-value: 6e-56 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrs 85 +wg+ fl ++ ++s+ + +++++++++ keev+kll + +++d+ + L+lid+LqrLGisy+Fe+eI+e+L++i+++ XP_003596560.1 36 IWGHLFL-KYDSESM-----EIDDNMMQQVQMQKEEVKKLLLS----SRNDMAQILNLIDSLQRLGISYQFEHEIDEALEQIHNN 110 6*****9.6777774.....47799****************53....35899999****************************** PP -----------.------------------------------------------------------------------------- CS Terpene_synth_N-terminal 86 weekkseeeed.dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhL 169 +++k+ +e+ dl+ Al FrLLRq+G+++ssd+F+kFk+ +gnf+e++s+d++g+ LYeA+hl+++ge+iL+eal+Ft + L XP_003596560.1 111 FSDNKEMTSEEgDLHFLALVFRLLRQKGHHMSSDIFEKFKNPKGNFNEKISKDIQGMWRLYEAAHLMIHGEDILDEALDFTYSKL 195 999854444447************************************************************************* PP ----------------------- CS Terpene_synth_N-terminal 170 keslseelsdespnlaeeVehaL 192 ++l++++ sp la++V+h L XP_003596560.1 196 -NTLETNQ--VSPFLATQVRHCL 215 .6677654..5678******987 PP >> XP_003615860.2 sesquiterpene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 180.8 0.5 7.3e-56 7e-53 1 192 [] 18 196 .. 18 197 .. 0.89 Alignments for each domain: == domain 1 score: 180.8 bits; conditional E-value: 7.3e-56 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrs 85 +wgd+fl ++ ++s+ + ++++ ++e+lk++vr++l v++ +k+ ek++lid++ rLG+syhFe+eI+e+L++i+++ XP_003615860.2 18 VWGDYFL-RYASESM-----EVDQSIAAQIETLKNNVRDML--VSN--TKNPLEKVHLIDSICRLGVSYHFENEIEEVLQHIHKN 92 5*****9.6888874.....356778889************..443..57888******************************** PP ----.-------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 86 week.kseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhL 169 + ++ + ed+l A+ FrLLRq+G +vs++vF+kFkde+g+f++++ dv+g+lsLYeA+hl+++ge+iLe+al+Ft++hL XP_003615860.2 93 YVQNgEIIIFEDNLCSLAVLFRLLRQQGLHVSPNVFNKFKDEQGKFSKRIIVDVEGMLSLYEATHLMVQGEDILEDALAFTTTHL 177 **9876666777************************************************************************* PP ----------------------- CS Terpene_synth_N-terminal 170 keslseelsdespnlaeeVehaL 192 + +++e+ ++p ++V+h L XP_003615860.2 178 -DFVANES--SHP-RVTQVKHCL 196 .8777664..334.677888876 PP >> XP_013455658.1 sesquiterpene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 179.2 1.6 2.2e-55 2.1e-52 1 192 [] 31 208 .. 31 208 .. 0.91 Alignments for each domain: == domain 1 score: 179.2 bits; conditional E-value: 2.2e-55 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrs 85 +w+d+fl ++ ++s+ + +e+++ ++e lk+evr+++ v++ ++ ++k++lid++ rLG++yhF++eI+e+L +++++ XP_013455658.1 31 IWKDYFL-QYASESM-----ELDEKIRPQIESLKKEVRNMI--VSK--IENPFAKVHLIDSICRLGVNYHFQHEIDEALLHFHEN 105 6******.7888884.....47799****************..544..46888*******************************9 PP ----.-------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 86 week.kseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhL 169 e+ + ed+l+t+++ FrLLRq+G+ vs+++F+kFkd +gnf+e+l++dv+g+lsLYeAsh++++ge+iLe+al+Ft +L XP_013455658.1 106 CVENgD-LIIEDNLHTISVLFRLLRQQGFCVSPNAFNKFKDTQGNFSEKLATDVEGMLSLYEASHVRIHGEDILEDALNFTYAYL 189 998742.33445************************************************************************* PP ----------------------- CS Terpene_synth_N-terminal 170 keslseelsdespnlaeeVehaL 192 es++++l+ ++l+ +++h+L XP_013455658.1 190 -ESIANQLN---HSLSSQIKHSL 208 .99998863...35******997 PP >> XP_013455657.1 sesquiterpene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 178.7 1.6 3.2e-55 3.1e-52 1 192 [] 31 208 .. 31 208 .. 0.91 Alignments for each domain: == domain 1 score: 178.7 bits; conditional E-value: 3.2e-55 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrs 85 +w+d+fl ++ ++s+ + +e+++ ++e lk+evr+++ v++ ++ ++k++lid++ rLG++yhF++eI+e+L +++++ XP_013455657.1 31 IWKDYFL-QYASESM-----ELDEKIRPQIESLKKEVRNMI--VSK--IENPFAKVHLIDSICRLGVNYHFQHEIDEALLHFHEN 105 6******.7888884.....47799****************..544..46888*******************************9 PP ----.-------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 86 week.kseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhL 169 e+ + ed+l+t+++ FrLLRq+G+ vs+++F+kFkd +gnf+e+l++dv+g+lsLYeAsh++++ge+iLe+al+Ft +L XP_013455657.1 106 CVENgD-LIIEDNLHTISVLFRLLRQQGFCVSPNAFNKFKDTQGNFSEKLATDVEGMLSLYEASHVRIHGEDILEDALNFTYAYL 189 998742.33445************************************************************************* PP ----------------------- CS Terpene_synth_N-terminal 170 keslseelsdespnlaeeVehaL 192 es++++l+ ++l+ +++h+L XP_013455657.1 190 -ESIANQLN---HSLSSQIKHSL 208 .99998863...35******987 PP >> XP_003596557.1 terpene synthase family, metal-binding domain protein [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 178.9 4.3 2.8e-55 2.7e-52 1 187 [. 23 198 .. 23 203 .. 0.89 Alignments for each domain: == domain 1 score: 178.9 bits; conditional E-value: 2.8e-55 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrs 85 +wgdvfl+ + ++p++ +++++++++ keevrk+++++ ++d+++kL++id+LqrLGisyhFe+eI+e+L++i+++ XP_003596557.1 23 IWGDVFLQ-YD-----SQPMEINDNMKTQVQMQKEEVRKIFQSS----SNDISQKLNFIDSLQRLGISYHFEREIDEALEQIHKN 97 6******5.43.....356788999****************744....489********************************** PP -----------.----------------------.-------------------------------------------------- CS Terpene_synth_N-terminal 86 weekkseeeed.dletvAlaFrLLRqhGydvssd.vFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkh 168 +++k+ +++ +l+ Al+FrLLR++Gy++ssd +F+kFk+++g+++e++s+dv+g+ sLYeA++l++++e+iL+eal+Ft +h XP_003596557.1 98 LTKNKEITTKEgSLHFLALEFRLLRKKGYHISSDeIFEKFKNNKGSLNENISKDVQGMWSLYEAAQLRIHDEDILDEALDFTYSH 182 **9977776668*********************989************************************************* PP ------------------- CS Terpene_synth_N-terminal 169 Lkeslseelsdespnlaee 187 L++++++el sp la++ XP_003596557.1 183 LNSLITNEL---SPFLAKQ 198 *66776553...4446655 PP >> XP_013443915.1 terpene synthase family, metal-binding domain protein [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 179.5 2.2 1.8e-55 1.7e-52 2 192 .] 23 202 .. 22 202 .. 0.89 Alignments for each domain: == domain 1 score: 179.5 bits; conditional E-value: 1.8e-55 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 2 wgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrsw 86 wg+ f+ ++ + +l + e+++++++ keevrk+++++ ++++++kL++id+LqrLGisyhFe+eI+eiL++i ++ XP_013443915.1 23 WGNRFI-QYADYEL----TDITENMKNQIQIQKEEVRKIFQSS----SNSISQKLNIIDSLQRLGISYHFEREIDEILEKIQDTF 98 999999.6776664....345589999*************744....47999********************************* PP ---.--------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 87 eek.kseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLk 170 +++ ee l+ +AlaFrLLRq+G+++ssd+Fk+Fk++ g+f+e+ +dv+g+ sLYeA+hl ++ge+iL+eal Ft+ hL+ XP_013443915.1 99 TTNiV-TIEEGGLHFCALAFRLLRQKGHHISSDIFKNFKNNMGSFDEKVVKDVQGMWSLYEAAHLKIHGEDILDEALVFTHAHLN 182 99853.33345*************************************************************************8 PP ---------------------- CS Terpene_synth_N-terminal 171 eslseelsdespnlaeeVehaL 192 +++++++ sp l ++++ L XP_013443915.1 183 SKINTNQ--LSPFLDAQIRQCL 202 8888774..4567999998765 PP >> XP_013455551.1 (E)-beta-ocimene/myrcene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 179.4 1.3 2e-55 1.9e-52 1 192 [] 54 227 .. 54 227 .. 0.90 Alignments for each domain: == domain 1 score: 179.4 bits; conditional E-value: 2e-55 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrs 85 +w++++l+slk ++ +++++++++++l+eev++++k +++ + Lelidt+++LG+syhFeeeI e+Ld++ + XP_013455551.1 54 IWNYDILQSLKHDY-------EDARYVDRSRRLQEEVKRMIK-------DENVNILELIDTVKQLGLSYHFEEEIGEALDRFLSL 124 6**********999.......56999*9*************4.......455588****************************99 PP ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 86 weekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLk 170 + + +++ ++l+++Al+FrLLR++Gyd+s+d+F+kFkd++gnfk++l +d+kg+lsLY+As ls+ege+iL+ea++Ft+ hLk XP_013455551.1 125 EKCSGRNNFGRSLHETALRFRLLREYGYDISPDIFEKFKDHNGNFKACLVQDIKGMLSLYDASFLSYEGEQILDEANAFTSIHLK 209 88765556666*************************************************************************5 PP ---------------------- CS Terpene_synth_N-terminal 171 eslseelsdespnlaeeVehaL 192 + lse + s+ l ++V+h+L XP_013455551.1 210 D-LSEGR---SSILIDQVNHSL 227 5.55443...224999999987 PP >> XP_013460258.1 sesquiterpene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 178.1 0.9 4.9e-55 4.7e-52 1 192 [] 26 204 .. 26 208 .. 0.91 Alignments for each domain: == domain 1 score: 178.1 bits; conditional E-value: 4.9e-55 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrs 85 +wgd+f+ ++ ++s+ + +e+++ ++e+lk +vrk+l v++ +++ +k++lid++ rLG++yhFe+eI+eiL++i+++ XP_013460258.1 26 VWGDYFI-QYASESM-----ELDENIKVQIETLKTDVRKML--VSK--SEKPLAKVHLIDSICRLGLNYHFEDEIDEILQDIHKN 100 5******.7888884.....46688999*************..443..46667******************************** PP ----.-------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 86 week.kseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhL 169 + ++ + ed+l A+ FrLLRq+G +vs++vF kFkd++gnf+e+l +dv+++l LYeA+h++++ge iLeeal+Ft++hL XP_013460258.1 101 YVQNgEIITFEDNLCSLAVLFRLLRQQGLHVSPNVFYKFKDDQGNFSERLIRDVEEMLCLYEATHVMIHGEGILEEALAFTTTHL 185 ***987788888************************************************************************* PP ----------------------- CS Terpene_synth_N-terminal 170 keslseelsdespnlaeeVehaL 192 es++++l ++p a +V+h+L XP_013460258.1 186 -ESIAKQL--SHP-RAVQVKHSL 204 .9899886..334.677888876 PP >> XP_013454913.1 terpene synthase family, metal-binding domain protein [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 176.7 2.8 1.3e-54 1.3e-51 1 190 [. 30 208 .. 30 210 .. 0.91 Alignments for each domain: == domain 1 score: 176.7 bits; conditional E-value: 1.3e-54 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrs 85 +wg++fl ++ ++s+ +++++++++ keev+k++ ++ ++d++++L+lid+L+rLGisyhFe+eI+e+L++iy++ XP_013454913.1 30 VWGHIFL-QYDSESMG----IINDNMKQQVQMPKEEVKKIFLSC----KNDVSQQLNLIDSLHRLGISYHFESEIDEALKQIYTK 105 5******.78888754....66799****************655....47999******************************** PP -----------.------------------------------------------------------------------------- CS Terpene_synth_N-terminal 86 weekkseeeed.dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhL 169 +++k+ +++ l+ AlaFrLL q+Gy++ss++F+kFk++e+nf+e+ls+dv+g+ sLYeA++l++++e+iL+eal+Ft +hL XP_013454913.1 106 FTNNKEITTNEgGLHFLALAFRLLWQKGYQISSEIFEKFKNNEENFNEKLSKDVQGMWSLYEATQLRVHNEDILDEALDFTYSHL 190 **9977777778************************************************************************* PP --------------------- CS Terpene_synth_N-terminal 170 keslseelsdespnlaeeVeh 190 +++++++l sp l +++++ XP_013454913.1 191 NSYINTQL---SPFLCTQIRR 208 87888775...4457777766 PP >> XP_003621314.2 copalyldiphosphate synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 169.1 0.0 2.8e-52 2.7e-49 1 192 [] 183 389 .. 183 389 .. 0.85 2 ? -0.8 0.2 3.4 3.3e+03 11 48 .. 639 674 .. 632 688 .. 0.48 Alignments for each domain: == domain 1 score: 169.1 bits; conditional E-value: 2.8e-52 --------------------------------......----------------------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaek......lkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiL 79 dw++ ++l+ ++gs+++s s+ta al+ ++++ l++ v+k +vp p d++e+ +++d+L+rLGis++F++eIk+++ XP_003621314.2 183 DWKQLLKLQSQDGSFLTSTSSTAFALM-QTKDencfkyLNKIVNKFNGGVPFAFPLDTFERTWVVDRLERLGISRYFQQEIKDCM 266 7**********************9999.55555988877555666555************************************* PP ----------...-------...---------------------------------------.--...----------------- CS Terpene_synth_N-terminal 80 deiyrsweek...kseeeed...dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkesls.ed...vkgllsLYeAshlsteg 154 ++yr+w+ek + ++ + d++++++aFrLLR hG++vs +vFk+F+ +g+f ++++ e v+ ++sLY+A++++++g XP_003621314.2 267 CYVYRYWTEKgifS-GRN-SnvqDIDDTSMAFRLLRLHGHHVSANVFKNFER-NGEF-FCFAgERtqsVTPMYSLYKATQVMFPG 347 *********88642.233.2478***************************95.6666.6666333566999************** PP -----------------.--------...------------- CS Terpene_synth_N-terminal 155 eeiLeealsFtrkhLke.slseelsd...espnlaeeVehaL 192 e+iLe+a++F+ ++L+e s ++el d +++nl e+ +aL XP_003621314.2 348 EKILEQAKHFSANFLREkSEANELIDkwvIMKNLPGEIAYAL 389 *****************5555555445854448999999998 PP == domain 2 score: -0.8 bits; conditional E-value: 3.4 -------------------------------------- CS Terpene_synth_N-terminal 11 kngslfnspsataealeeeaeklkeevrkllkavpavy 48 +++++++s+s+t+e+++ ++e + ++++l++ v + + XP_003621314.2 639 QKDKVKSSSSNTHEKIT-NSE-TESKMQELVELVFQKS 674 44444445555555554.222.2233344443222333 PP >> XP_013449739.1 copalyldiphosphate synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 168.6 0.0 4.2e-52 4e-49 2 192 .] 150 355 .. 149 355 .. 0.86 2 ? -1.8 0.1 6.9 6.7e+03 140 176 .. 439 475 .. 424 490 .. 0.69 Alignments for each domain: == domain 1 score: 168.6 bits; conditional E-value: 4.2e-52 -------------------------------......------------------------------------------------ CS Terpene_synth_N-terminal 2 wgdvfllslkngslfnspsataealeeeaek......lkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLd 80 w ++++l+ ++gs++ sps+ta a + ++++ l + v+k +vp+v p+dl+e+++++d+L+rLGi ++F++eIke+ d XP_013449739.1 150 WYQILKLQSQDGSFLFSPSSTAFAHM-QTKDeyalyyLDNVVNKFNGGVPNVFPVDLFEHMWVVDRLERLGILRYFQQEIKECVD 233 9999******************8788.55555899988666666666************************************** PP ----------------.....-----------------------------------------....------------------- CS Terpene_synth_N-terminal 81 eiyrsweekkseeeed.....dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsed....vkgllsLYeAshlstegee 156 ++ r+w++k + ++++ d++++A+ Fr+LR hG++vs+dvFk+F++ +g+f ++++ + v+g+++LY+As++ +++e+ XP_013449739.1 234 YVSRYWTKK-GICWARnsevqDIDDTAMGFRILRLHGHQVSPDVFKQFEK-SGEF-FCFAGQlnqaVTGMFNLYRASQVLFQEEK 315 *******96.45555555789***************************95.6666.5555434556******************* PP ---------------.------.--.---.---------- CS Terpene_synth_N-terminal 157 iLeealsFtrkhLke.slseel.sd.esp.nlaeeVehaL 192 iLe+a++F+ k+L + ++++el ++ +++ +l eV +aL XP_013449739.1 316 ILEDAKNFSAKYLMKkRAANELlDKwIITkDLPGEVGYAL 355 *************996777776544856669*****9998 PP == domain 2 score: -1.8 bits; conditional E-value: 6.9 ------------------------.------------- CS Terpene_synth_N-terminal 140 gllsLYeAshlstegeeiLeeals.FtrkhLkeslsee 176 l+ Y A+ +e e Le+ t+ +L + l+++ XP_013449739.1 439 LLIAYYVAAANIFEPERSLERLAWaKTTALL-QILESN 475 4778899999999999999985431444555.655544 PP >> XP_003596565.1 sesquiterpene synthase, putative [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 167.8 6.7 7.1e-52 6.8e-49 1 192 [] 30 209 .. 30 209 .. 0.91 Alignments for each domain: == domain 1 score: 167.8 bits; conditional E-value: 7.1e-52 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrs 85 +w +vfl ++ ++s+ + + ++++++e k+ev+k++ +++d+e++L++id+LqrLGisyhFe+eI+e+L++i+++ XP_003596565.1 30 IWRNVFL-QYDSESV-----EINGNMKQQVEMEKDEVKKMFL----FSRNDSEQNLNFIDSLQRLGISYHFEREIDEALEQIHNT 104 699***9.7888885.....477999*9*************5....3458999******************************** PP -----------.------------------------------------------------------------------------- CS Terpene_synth_N-terminal 86 weekkseeeed.dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhL 169 +++k+ +++ +l+ AlaFrLLRq++++ s d+F+kFk+++gnf+e+l +dv+++ sLYeA++l ++ge+iL+eal+Ft +hL XP_003596565.1 105 FTNNKEITTKEgSLHFLALAFRLLRQNRHHLSADIFEKFKNNKGNFNEKLFQDVQEMWSLYEAAQLKINGEDILNEALDFTFSHL 189 **9977776668************************************************************************* PP ----------------------- CS Terpene_synth_N-terminal 170 keslseelsdespnlaeeVehaL 192 +++++++ sp l+++++h L XP_003596565.1 190 NSLITNK---LSPFLEKKIRHCL 209 6666654...3567999**9987 PP >> XP_003628406.2 monoterpene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 164.3 3.1 8.4e-51 8.1e-48 1 192 [] 64 236 .. 64 236 .. 0.90 Alignments for each domain: == domain 1 score: 164.3 bits; conditional E-value: 8.4e-51 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrs 85 +w+d++++sl++++ ++e + ++ + l+e+v+ +l ++ +++ ++Le+id Lqr+G+syhF++eI++iLd+iy++ XP_003628406.2 64 IWTDDYIQSLSSEY-------KEEIYGDQRKVLREKVKIML--CK---IENELDQLEFIDVLQRIGVSYHFNNEIRDILDNIYNK 136 699****9999999.......77999*9*************..33...36778******************************99 PP ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 86 weekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLk 170 +++k +++l+++Al+FrLLRqhGyd+s d F F++e nfk+ dv+g+ls+YeAs s+e+e+iL+ea++Ft+++Lk XP_003628406.2 137 QTSKL----KKNLHATALKFRLLRQHGYDISTDCFVCFQNEVCNFKKGQFVDVHGMLSMYEASFHSFEDETILDEARDFTTNFLK 217 88743....349***********************************8779*********************************8 PP ---------------------- CS Terpene_synth_N-terminal 171 eslseelsdespnlaeeVehaL 192 +l++++ + +++ ++haL XP_003628406.2 218 GYLKQNRGN---HISLLISHAL 236 899977533...5777888887 PP >> XP_013464204.1 monoterpene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 159.9 3.7 1.9e-49 1.8e-46 1 192 [] 62 234 .. 62 234 .. 0.91 2 ? -1.7 0.0 6.7 6.5e+03 103 117 .. 388 402 .. 367 404 .. 0.90 Alignments for each domain: == domain 1 score: 159.9 bits; conditional E-value: 1.9e-49 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrs 85 +w++++++sl++++ ++ +++++ lke+vr++l+ +++++ +Lelid LqrLG+syhF++eI++iLd+iy++ XP_013464204.1 62 IWTYDYIQSLSSEY-------KEVMYRKQCSILKEKVRMMLN-----KTENELTQLELIDVLQRLGVSYHFNNEIRDILDNIYNK 134 69999999999999.......67889999999*********5.....236788******************************99 PP ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 86 weekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLk 170 ++ k +++l+++A +FrLLRqhGyd s dv+ F+de nfk+ + dv+g+lsLYeAs +e+e iL+ea++ t+k+Lk XP_013464204.1 135 QTFKL----KKNLHATAREFRLLRQHGYDLSTDVIVCFEDEICNFKNGHFVDVEGMLSLYEASFHLFEDEPILDEARDVTSKFLK 215 77632....349**********************************98779*********************************9 PP ---------------------- CS Terpene_synth_N-terminal 171 eslseelsdespnlaeeVehaL 192 e l+++ d +n++ +++haL XP_013464204.1 216 EFLDKNG-D--KNISLQISHAL 234 9999775.2..369999*9998 PP == domain 2 score: -1.7 bits; conditional E-value: 6.7 --------------- CS Terpene_synth_N-terminal 103 laFrLLRqhGydvss 117 laF L++ Gy++++ XP_013464204.1 388 LAFETLKKCGYHITP 402 79**********976 PP >> XP_013464201.1 monoterpene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 159.0 3.7 3.5e-49 3.3e-46 1 192 [] 62 234 .. 62 234 .. 0.91 2 ? -2.2 0.0 9.2 8.8e+03 103 117 .. 388 402 .. 373 406 .. 0.90 Alignments for each domain: == domain 1 score: 159.0 bits; conditional E-value: 3.5e-49 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrs 85 +w++++++sl++++ ++ +++++ lke+vr++l+ +++++ +Lelid LqrLG+syhF++eI++iLd+iy++ XP_013464201.1 62 IWTYDYIQSLSSEY-------KEVMYRKQCSILKEKVRMMLN-----KTENELTQLELIDVLQRLGVSYHFNNEIRDILDNIYNK 134 69999999999999.......67889999999*********5.....236788******************************99 PP ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 86 weekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLk 170 ++ k +++l+++A +FrLLRqhGyd s dv+ F+de nfk+ + dv+g+lsLYeAs +e+e iL+ea++ t+k+Lk XP_013464201.1 135 QTFKL----KKNLHATAREFRLLRQHGYDLSTDVIVCFEDEICNFKNGHFVDVEGMLSLYEASFHLFEDEPILDEARDVTSKFLK 215 77632....349**********************************98779*********************************9 PP ---------------------- CS Terpene_synth_N-terminal 171 eslseelsdespnlaeeVehaL 192 e l+++ d +n++ +++haL XP_013464201.1 216 EFLDKNG-D--KNISLQISHAL 234 9999775.2..369999*9998 PP == domain 2 score: -2.2 bits; conditional E-value: 9.2 --------------- CS Terpene_synth_N-terminal 103 laFrLLRqhGydvss 117 laF L++ Gy++++ XP_013464201.1 388 LAFETLKKCGYHITP 402 79**********986 PP >> XP_003596036.1 monoterpene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 156.4 4.1 2.3e-48 2.2e-45 2 191 .. 68 237 .. 54 238 .. 0.82 2 ? -1.3 0.0 4.8 4.6e+03 157 173 .. 298 314 .. 296 327 .. 0.81 Alignments for each domain: == domain 1 score: 156.4 bits; conditional E-value: 2.3e-48 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 2 wgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrsw 86 w++++++sl+n ++ + ++e+ lke+vr++++++ +++ ++Le+id LqrLG++y+F++eI +iLd+iy+s+ XP_003596036.1 68 WTYDYIQSLTNLEV---------KHTKEFLMLKEKVRMMFNKM-----ENEIDQLEFIDVLQRLGVAYQFNNEIGKILDNIYNSQ 138 55555544444442.........22224444*********533.....5666******************************998 PP ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 87 eekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLke 171 +++ +++l++++l+FrLLRqhGy++s d+++ F d++++fke +s dv+g+lsLYe s s+e+e+iL+ea++Ft+k+Lke XP_003596036.1 139 TSML----KNNLYATSLKFRLLRQHGYNISTDILCCFLDKHDSFKEYHSFDVEGVLSLYESSFHSFEDETILDEARDFTSKCLKE 219 8853....349***********************************999**********************************99 PP .-------------------- CS Terpene_synth_N-terminal 172 .slseelsdespnlaeeVeha 191 ++++++ + + ++ha XP_003596036.1 220 yNMNQNSGT---YTSLLINHA 237 666655432...234456665 PP == domain 2 score: -1.3 bits; conditional E-value: 4.8 ----------------- CS Terpene_synth_N-terminal 157 iLeealsFtrkhLkesl 173 +L+e lsF+r+ L e++ XP_003596036.1 298 ELDEKLSFARNRLVENF 314 69***********8865 PP >> XP_013459981.1 Ent-kaurene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 156.3 0.1 2.4e-48 2.3e-45 3 187 .. 8 201 .. 6 206 .. 0.82 Alignments for each domain: == domain 1 score: 156.3 bits; conditional E-value: 2.4e-48 ------------------------------......----------....----------------------------------- CS Terpene_synth_N-terminal 3 gdvfllslkngslfnspsataealeeeaek......lkeevrkllk....avpavypkdleekLelidtLqrLGisyhFeeeIke 77 + ++++++kngslfnsp++ta+ ++ ++++ l +++l+ avp+vyp d++ +L +id+L+rLGi++hFe+eI++ XP_013459981.1 8 NTIIKYQRKNGSLFNSPATTAAVFQ-HSNNadclsyL----QSVLQkfgnAVPTVYPLDIYGRLYMIDSLERLGIDRHFEKEIQS 87 567899***************9999.55555986665....555555556*********************************** PP -------------------...---------------------------------------...--------------------- CS Terpene_synth_N-terminal 78 iLdeiyrsweekkseeeed...dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkesls...edvkgllsLYeAshlstegee 156 +Lde+yr+w +++ ed d +t+A+aFr+LR +Gydvssd F ++ + ++f +sl+ +dv+++l+LY+As++ ++ +e XP_013459981.1 88 VLDETYRYWLQEE----EDiflDPTTCAMAFRILRLNGYDVSSDPFYQYSE--DKFANSLKgylKDVSAVLELYKASQVIIHPDE 166 **********943....33467***************************95..4477777633466***************9988 PP .---------------.------.-----.----- CS Terpene_synth_N-terminal 157 .iLeealsFtrkhLke.slseel.sdesp.nlaee 187 +L + s+tr++L++ s++ +l d+ + + +e XP_013459981.1 167 sVLFKQSSWTRHFLEQdSSTYQLyADKLRiYVDNE 201 8*************995544444333333335555 PP >> XP_003617711.2 sesquiterpene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 151.0 2.1 9.9e-47 9.5e-44 1 192 [] 26 184 .. 26 188 .. 0.87 Alignments for each domain: == domain 1 score: 151.0 bits; conditional E-value: 9.9e-47 -----------------------------------------------------.------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdle.ekLelidtLqrLGisyhFeeeIkeiLdeiyr 84 +wgd+fl ++ ++s+ + +++++ ++e+lk +v+++l v++ +++ +k++lid++ rLGisyhFe+eI+e+L +i++ XP_003617711.2 26 VWGDYFL-QYASESM-----ELDQNMVARIETLKTDVKNML--VSK---TEMPlAKIHLIDSICRLGISYHFEHEIEEVLLHIFT 99 5******.7888884.....46689999*************..443...45555******************************4 PP ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 85 sweekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhL 169 LLRq+G++vs++vF+kFkde+gnf+e+l dv+g+lsLYeA+h++++g++iLeeal+Ft++hL XP_003617711.2 100 I-------------------IMLLRQQGFHVSPNVFNKFKDEQGNFSERLIMDVEGMLSLYEATHVRVHGDDILEEALAFTTTHL 165 4...................46*************************************************************** PP ----------------------- CS Terpene_synth_N-terminal 170 keslseelsdespnlaeeVehaL 192 es+++++s++ a +V+h+L XP_003617711.2 166 -ESIANQTSHS---NAIQVRHSL 184 .8888775332...355666654 PP >> XP_003600343.2 Ent-kaurene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 155.5 0.1 4.2e-48 4e-45 3 187 .. 199 392 .. 197 397 .. 0.82 Alignments for each domain: == domain 1 score: 155.5 bits; conditional E-value: 4.2e-48 ------------------------------......----------....----------------------------------- CS Terpene_synth_N-terminal 3 gdvfllslkngslfnspsataealeeeaek......lkeevrkllk....avpavypkdleekLelidtLqrLGisyhFeeeIke 77 + ++++++kngslfnsp++ta+ ++ ++++ l +++l+ avp+vyp d++ +L +id+L+rLGi++hFe+eI++ XP_003600343.2 199 NTIIKYQRKNGSLFNSPATTAAVFQ-HSNNadclsyL----QSVLQkfgnAVPTVYPLDIYGRLYMIDSLERLGIDRHFEKEIQS 278 567899***************9999.55555986665....555555556*********************************** PP -------------------...---------------------------------------...--------------------- CS Terpene_synth_N-terminal 78 iLdeiyrsweekkseeeed...dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkesls...edvkgllsLYeAshlstegee 156 +Lde+yr+w +++ ed d +t+A+aFr+LR +Gydvssd F ++ + ++f +sl+ +dv+++l+LY+As++ ++ +e XP_003600343.2 279 VLDETYRYWLQEE----EDiflDPTTCAMAFRILRLNGYDVSSDPFYQYSE--DKFANSLKgylKDVSAVLELYKASQVIIHPDE 357 **********943....33467***************************95..4477777633466***************9988 PP .---------------.------.-----.----- CS Terpene_synth_N-terminal 157 .iLeealsFtrkhLke.slseel.sdesp.nlaee 187 +L + s+tr++L++ s++ +l d+ + + +e XP_003600343.2 358 sVLFKQSSWTRHFLEQdSSTYQLyADKLRiYVDNE 392 8*************995544444333333334555 PP >> XP_013459978.1 Ent-kaurene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 155.5 0.1 4.3e-48 4.1e-45 3 187 .. 212 405 .. 210 410 .. 0.82 Alignments for each domain: == domain 1 score: 155.5 bits; conditional E-value: 4.3e-48 ------------------------------......----------....----------------------------------- CS Terpene_synth_N-terminal 3 gdvfllslkngslfnspsataealeeeaek......lkeevrkllk....avpavypkdleekLelidtLqrLGisyhFeeeIke 77 + ++++++kngslfnsp++ta+ ++ ++++ l +++l+ avp+vyp d++ +L +id+L+rLGi++hFe+eI++ XP_013459978.1 212 NTIIKYQRKNGSLFNSPATTAAVFQ-HSNNadclsyL----QSVLQkfgnAVPTVYPLDIYGRLYMIDSLERLGIDRHFEKEIQS 291 567899***************9999.55555986665....555555556*********************************** PP -------------------...---------------------------------------...--------------------- CS Terpene_synth_N-terminal 78 iLdeiyrsweekkseeeed...dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkesls...edvkgllsLYeAshlstegee 156 +Lde+yr+w +++ ed d +t+A+aFr+LR +Gydvssd F ++ + ++f +sl+ +dv+++l+LY+As++ ++ +e XP_013459978.1 292 VLDETYRYWLQEE----EDiflDPTTCAMAFRILRLNGYDVSSDPFYQYSE--DKFANSLKgylKDVSAVLELYKASQVIIHPDE 370 **********943....33467***************************95..4477777633466***************9988 PP .---------------.------.-----.----- CS Terpene_synth_N-terminal 157 .iLeealsFtrkhLke.slseel.sdesp.nlaee 187 +L + s+tr++L++ s++ +l d+ + + +e XP_013459978.1 371 sVLFKQSSWTRHFLEQdSSTYQLyADKLRiYVDNE 405 8*************995544444333333334555 PP >> XP_013459980.1 Ent-kaurene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 155.5 0.1 4.3e-48 4.2e-45 3 187 .. 219 412 .. 217 417 .. 0.82 Alignments for each domain: == domain 1 score: 155.5 bits; conditional E-value: 4.3e-48 ------------------------------......----------....----------------------------------- CS Terpene_synth_N-terminal 3 gdvfllslkngslfnspsataealeeeaek......lkeevrkllk....avpavypkdleekLelidtLqrLGisyhFeeeIke 77 + ++++++kngslfnsp++ta+ ++ ++++ l +++l+ avp+vyp d++ +L +id+L+rLGi++hFe+eI++ XP_013459980.1 219 NTIIKYQRKNGSLFNSPATTAAVFQ-HSNNadclsyL----QSVLQkfgnAVPTVYPLDIYGRLYMIDSLERLGIDRHFEKEIQS 298 567899***************9999.55555986665....555555556*********************************** PP -------------------...---------------------------------------...--------------------- CS Terpene_synth_N-terminal 78 iLdeiyrsweekkseeeed...dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkesls...edvkgllsLYeAshlstegee 156 +Lde+yr+w +++ ed d +t+A+aFr+LR +Gydvssd F ++ + ++f +sl+ +dv+++l+LY+As++ ++ +e XP_013459980.1 299 VLDETYRYWLQEE----EDiflDPTTCAMAFRILRLNGYDVSSDPFYQYSE--DKFANSLKgylKDVSAVLELYKASQVIIHPDE 377 **********943....33467***************************95..4477777633466***************9988 PP .---------------.------.-----.----- CS Terpene_synth_N-terminal 157 .iLeealsFtrkhLke.slseel.sdesp.nlaee 187 +L + s+tr++L++ s++ +l d+ + + +e XP_013459980.1 378 sVLFKQSSWTRHFLEQdSSTYQLyADKLRiYVDNE 412 8*************995544444333333334555 PP >> XP_013459979.1 Ent-kaurene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 155.4 0.1 4.5e-48 4.4e-45 3 187 .. 219 412 .. 217 417 .. 0.82 Alignments for each domain: == domain 1 score: 155.4 bits; conditional E-value: 4.5e-48 ------------------------------......----------....----------------------------------- CS Terpene_synth_N-terminal 3 gdvfllslkngslfnspsataealeeeaek......lkeevrkllk....avpavypkdleekLelidtLqrLGisyhFeeeIke 77 + ++++++kngslfnsp++ta+ ++ ++++ l +++l+ avp+vyp d++ +L +id+L+rLGi++hFe+eI++ XP_013459979.1 219 NTIIKYQRKNGSLFNSPATTAAVFQ-HSNNadclsyL----QSVLQkfgnAVPTVYPLDIYGRLYMIDSLERLGIDRHFEKEIQS 298 567899***************9999.55555986665....555555556*********************************** PP -------------------...---------------------------------------...--------------------- CS Terpene_synth_N-terminal 78 iLdeiyrsweekkseeeed...dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkesls...edvkgllsLYeAshlstegee 156 +Lde+yr+w +++ ed d +t+A+aFr+LR +Gydvssd F ++ + ++f +sl+ +dv+++l+LY+As++ ++ +e XP_013459979.1 299 VLDETYRYWLQEE----EDiflDPTTCAMAFRILRLNGYDVSSDPFYQYSE--DKFANSLKgylKDVSAVLELYKASQVIIHPDE 377 **********943....33467***************************95..4477777633466***************9988 PP .---------------.------.-----.----- CS Terpene_synth_N-terminal 157 .iLeealsFtrkhLke.slseel.sdesp.nlaee 187 +L + s+tr++L++ s++ +l d+ + + +e XP_013459979.1 378 sVLFKQSSWTRHFLEQdSSTYQLyADKLRiYVDNE 412 8*************995544444333333334555 PP >> XP_013464190.1 Ent-kaurene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 153.4 0.0 1.9e-47 1.8e-44 4 188 .. 200 393 .. 197 397 .. 0.83 Alignments for each domain: == domain 1 score: 153.4 bits; conditional E-value: 1.9e-47 -----------------------------......----------....------------------------------------ CS Terpene_synth_N-terminal 4 dvfllslkngslfnspsataealeeeaek......lkeevrkllk....avpavypkdleekLelidtLqrLGisyhFeeeIkei 78 v+++++kngslfnsp++ta+a++ ++++ l +++l+ avp+vyp d++++L++id+L+rLGi++hF+eeI+++ XP_013464190.1 200 TVLKYQRKNGSLFNSPATTAAAFQ-HLKNadclsyL----QSVLEksgnAVPTVYPLDVYARLHMIDSLERLGINHHFKEEIQSV 279 67889****************999.88887986655....666656666************************************ PP ------------------...---------------------------------------...---------------------. CS Terpene_synth_N-terminal 79 Ldeiyrsweekkseeeed...dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkesls...edvkgllsLYeAshlstegee. 156 Lde+yr+w ++ ed d +t+A+aFr+LR +Gydvssd F ++ + ++f +sl+ +dv ++l+LY+As++ ++ +e XP_013464190.1 280 LDETYRYWLQRA----EDiflDPTTCAMAFRMLRLNGYDVSSDPFYEYSE--DKFANSLKgylKDVGAVLELYRASQVIIHPDEs 358 *********943....23467***************************95..4477777633456999************99888 PP ---------------.------.-----.------ CS Terpene_synth_N-terminal 157 iLeealsFtrkhLke.slseel.sdesp.nlaeeV 188 iL + s+tr++Lk+ s+ +l +d+++ + +eV XP_013464190.1 359 ILVKQSSWTRNLLKQdSSPYQLyTDKIRiYVDNEV 393 *************9955544444444444455555 PP >> XP_013457144.1 (3S)-linalool/(E)-nerolidol/(E,E)-geranyl linalool synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 136.0 2.4 4e-42 3.9e-39 26 176 .. 62 205 .. 38 216 .. 0.85 Alignments for each domain: == domain 1 score: 136.0 bits; conditional E-value: 4e-42 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 26 leeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrsweekkseeeeddletvAlaFrLLRq 110 +++ekl e v++ l +v +++ + L +id++qrL i+yhFeeeI+++L++ y + ++ ++++dl+++Al FrLLRq XP_013457144.1 62 SNNHSEKL-ELVKHELRNV----GENSLKGLYMIDAMQRLNIDYHFEEEIESFLRRQYVTSA--CGGSNHHDLHETALHFRLLRQ 139 34567777.7777777544....3677799****************************7755..5556666************** PP ------------------------------------------------------------------ CS Terpene_synth_N-terminal 111 hGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLkeslsee 176 +G+ v +vF+k+++ee++f+ +l e+++g++ L+eAshl + ge+iL+ea +F+rk Lke++++ XP_013457144.1 140 QGHFVPAEVFNKYTNEEEKFNPKLGENINGMIDLFEASHLNLAGEDILDEAGKFSRKILKERMTQF 205 ***********************************************************9998854 PP >> XP_003597053.1 sesquiterpene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 134.6 0.0 1.1e-41 1e-38 17 174 .. 55 199 .. 41 213 .. 0.87 Alignments for each domain: == domain 1 score: 134.6 bits; conditional E-value: 1.1e-41 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 17 nspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrsweekkseeeeddletv 101 sp +t+++++ ++++k + r+ l v+ ++d +L++id++qrLGi +h e+eI+ L +i++ + + +dl ++ XP_003597053.1 55 LSPLQTEDKTK-SLGQVKRRSREAL--VN---SNDPIVTLKMIDSIQRLGIGHHLEDEINIQLGRICDWDLS-------QDLFAT 126 47899999888.9999999999999..43...488889*****************************65443.......39**** PP ------------------------------------------------------------------------- CS Terpene_synth_N-terminal 102 AlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLkesls 174 +l+FrLLR +G sdvF+kF d++gnf+esl++dv g+lsLYeAs+l+te+eeiL++a++F+r L+e++ XP_003597053.1 127 SLQFRLLRHNGWTTCSDVFRKFLDKSGNFNESLTKDVWGMLSLYEASYLGTEDEEILKKAMEFSRARLSELIP 199 ********************************************************************88665 PP >> XP_013457143.1 (3S)-linalool/(E)-nerolidol/(E,E)-geranyl linalool synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 129.8 0.6 3.3e-40 3.1e-37 24 176 .. 50 198 .. 29 212 .. 0.82 Alignments for each domain: == domain 1 score: 129.8 bits; conditional E-value: 3.3e-40 ------------------------------------------------------------------..-------..-------- CS Terpene_synth_N-terminal 24 ealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrsweek..kseeeed..dletvAla 104 + +++a++l +ev++++ v + +k++ e L+++d++qrLG++y FeeeI+++L++ ++ + + ++ l + A + XP_013457143.1 50 DLHIRHAKAL-DEVKQVF--VRN-IRKNTDECLSMVDSIQRLGMEYNFEEEIEATLERKHTMLRFQnfQ---RNEyqGLSQAAFQ 127 5556688889.9******..655.56888899****************************988775322...23346******** PP ------------------------------------------------------------------------ CS Terpene_synth_N-terminal 105 FrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLkeslsee 176 Fr+LRq+Gy++s+d+F+kF d++g++k ++sed++g++ L+eAs+ls+ege+ L+++ +F+ ++L++ +s + XP_013457143.1 128 FRMLRQEGYYISPDIFDKFCDNKGKLKYTFSEDINGMIALFEASQLSIEGEDCLDNVGQFCGQYLNDWSS-T 198 *****************************************************************65333.2 PP >> XP_003593502.1 (E)-nerolidol/(E,E)-geranyl linalool synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 128.3 0.7 9.1e-40 8.8e-37 4 192 .] 197 392 .. 194 392 .. 0.84 Alignments for each domain: == domain 1 score: 128.3 bits; conditional E-value: 9.1e-40 -----------------------------.....----------....-----------.------------------------- CS Terpene_synth_N-terminal 4 dvfllslkngslfnspsataealeeeaek.....lkeevrkllk....avpavypkdle.ekLelidtLqrLGisyhFeeeIkei 78 d++++ +gslf+spsata+a++ + l ++l + avp+ yp+d+ kL++ ++Lq++G+ ++F eI+ + XP_003593502.1 197 DICKNLSADGSLFQSPSATAKAFMAYGTQecldyL----QSLAQrcpkAVPQAYPMDEDhIKLCIANQLQKFGLGEYFVGEIEVF 277 666666789***********999955555776665....444445555**********988************************ PP ------------------.-----------------------------------------....--------------------- CS Terpene_synth_N-terminal 79 Ldeiyrsweekkseeeed.dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsed....vkgllsLYeAshlstegeeiL 158 L ++yr+++++++++ + +l++ +laF LLR+hG++vs+ F++F ++++ +++++++d ++++l +++As+l+++ge++L XP_003593502.1 278 LAQVYRKYNKEQNSNMNAlQLQKDSLAFELLRTHGFKVSPLRFCWFLNDDE-IRAEIEKDykqfTSAMLHVFRASNLMFSGEYEL 361 *******999755544449****************************8887.888888778888999****************** PP ---------------------------------- CS Terpene_synth_N-terminal 159 eealsFtrkhLkeslseelsdespnlaeeVehaL 192 eea++F+rk+L++ +s+++ + + +++eh+L XP_003593502.1 362 EEARTFSRKLLEKIVSTRK-GCLE--LRQIEHEL 392 ***********77776554.3433..56777776 PP >> XP_003597054.1 sesquiterpene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 126.0 0.0 4.7e-39 4.5e-36 18 176 .. 56 200 .. 41 213 .. 0.84 Alignments for each domain: == domain 1 score: 126.0 bits; conditional E-value: 4.7e-39 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 18 spsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrsweekkseeeeddletvA 102 p +t+++++ +e++k + ++ l +++d L++id++q LGi +h e+eI+ L +i++ + + dl ++ XP_003597054.1 56 APLQTDDSTK-SLEQVKRKSQEALL-----NSSDPMVALKMIDSIQGLGIGHHLEDEINIQLGRICDWDLS-L------DLFGTS 127 4666776666.88888888888773.....44788899****************************65433.2......9***** PP -------------------------------------------------------------------------- CS Terpene_synth_N-terminal 103 laFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLkeslsee 176 l+FrLLR +G sdvFkk+ d++gnfkesl++d+ g+lsLYeAshl+te+eeiL++a++F++ hL+e++ + XP_003597054.1 128 LQFRLLRHNGWPTCSDVFKKYLDKSGNFKESLTKDIWGMLSLYEASHLGTEDEEILKRAMKFSSAHLNELIP-H 200 *******************************************************************77665.3 PP >> XP_003612878.2 copalyldiphosphate synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 124.8 0.1 1.1e-38 1e-35 56 192 .] 1 135 [. 1 135 [. 0.87 2 ? 0.3 0.0 1.6 1.5e+03 141 177 .. 221 257 .. 200 272 .. 0.72 Alignments for each domain: == domain 1 score: 124.8 bits; conditional E-value: 1.1e-38 ----------------------------------------------------------------------------------... CS Terpene_synth_N-terminal 56 LelidtLqrLGisyhFeeeIkeiLdeiyrsweekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsed... 137 +++ d+L++LGis++F++eIke +++ + + + d++++ + FrLLR hG++vs+dvFk+F++ +g+f ++++ + XP_003612878.2 1 MWVLDRLEHLGISRYFRQEIKESVNYVSSVNVQ--------DIDDITMGFRLLRLHGHQVSPDVFKHFEK-SGEF-FCFAGQlnq 75 6899************************88666........9**************************95.6666.555543455 PP .----------------------------------.------.--..------------- CS Terpene_synth_N-terminal 138 .vkgllsLYeAshlstegeeiLeealsFtrkhLke.slseel.sd..espnlaeeVehaL 192 v+g+++LY+As++ +++e+iLe+a++F+ ++L++ +++++l ++ ++++l eV +aL XP_003612878.2 76 aVTGMFNLYRASQVLFQEEKILEDAKNFSANYLTKkRAANKLlDKwiIIKDLPGEVGYAL 135 6********************************996666666444865558999999998 PP == domain 2 score: 0.3 bits; conditional E-value: 1.6 -----------------------.-------------- CS Terpene_synth_N-terminal 141 llsLYeAshlstegeeiLeeals.FtrkhLkeslseel 177 l+ Y A+ +e e Le+ t+ +L + l+++ XP_003612878.2 221 LIAYYVAAASIFEPERSLERLAWaKTTALL-QILESNF 257 7788999*********99985441455555.6555443 PP >> XP_003593505.2 (E)-nerolidol/(E,E)-geranyl linalool synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 123.9 0.8 2.1e-38 2e-35 4 174 .. 197 382 .. 194 405 .. 0.84 Alignments for each domain: == domain 1 score: 123.9 bits; conditional E-value: 2.1e-38 -----------------------------.....---------------------.----------------------------- CS Terpene_synth_N-terminal 4 dvfllslkngslfnspsataealeeeaek.....lkeevrkllkavpavypkdle.ekLelidtLqrLGisyhFeeeIkeiLdei 82 d++++ +gslf+spsata+a++ + l+ ++ kavp+ yp+d+ kL+++++Lq+LG+ ++F eI+ +L+++ XP_003593505.2 197 DICKNLSADGSLFQSPSATAKAFMAYGTQecldcLQSLAQRCPKAVPQAYPMDEDlIKLCIVNQLQKLGLGEYFMGEIEILLTKV 281 666666789***********999955555786665444455555***********99**************************** PP --------------.........-----------------------------------------....----------------- CS Terpene_synth_N-terminal 83 yrsweekkseeeed.........dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsed....vkgllsLYeAshlsteg 154 yr++++++++ + +l++ +laF LLR+hG++vs+ F++F ++++ ++++ ++d +++l +++As+l+++g XP_003593505.2 282 YRNYSKEQNS---RvqplnmnalQLQKDSLAFELLRTHGFKVSPLRFCWFLNHDE-IRAKVEKDyehfSSAMLHVFRASNLMFSG 362 ***9985433...234688888999999***********************9888.777777778887888************** PP -------------------- CS Terpene_synth_N-terminal 155 eeiLeealsFtrkhLkesls 174 e++L+ea++F+rk+L++ +s XP_003593505.2 363 EYELKEARTFSRKLLEQIVS 382 ***************77555 PP >> XP_003593394.2 (3S)-linalool/(E)-nerolidol/(E,E)-geranyl linalool synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 120.6 2.6 2.1e-37 2e-34 32 178 .. 14 156 .. 3 168 .. 0.84 Alignments for each domain: == domain 1 score: 120.6 bits; conditional E-value: 2.1e-37 ----------------------------------------------------------.-------..----------------- CS Terpene_synth_N-terminal 32 klkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrsweek.kseeeed..dletvAlaFrLLRqhGy 113 + k+ +kll + + +d + L++id +qrLGi++hF eeI+++L++ ++ +++ + + +l++vAl FrLLRq G+ XP_003593394.2 14 EAKQAYKKLL--A---SDEDPMKSLCMIDIIQRLGIEHHFAEEIEAALQNQHKMFSRNaI--DFVHshELHEVALTFRLLRQGGH 91 4556667777..3...34777799****************************99988643..333345***************** PP ----------------------------------------------------------------- CS Terpene_synth_N-terminal 114 dvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLkeslseels 178 +v+sd+F+ + ++ nf+e++ edvk+l+ +YeAs+ls+ege+ L+++ + ++++L+ ls++++ XP_003593394.2 92 YVKSDIFDSLMFNKRNFSEKFGEDVKSLIAMYEASQLSIEGEDDLDDIGHLSSELLHGWLSSHQN 156 ********************************************************876665542 PP >> XP_003621227.1 (E)-beta-ocimene/myrcene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 119.5 2.9 4.6e-37 4.4e-34 1 192 [] 26 201 .. 26 201 .. 0.89 Alignments for each domain: == domain 1 score: 119.5 bits; conditional E-value: 4.6e-37 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrs 85 +w+d+fl+sl +++ ++e+++ +++k ev++ + v ++ d+ +kLe++d +q+LG+++hFe+eI+e+L++i+ s XP_003621227.1 26 IWKDDFLQSLGSKY-------DKEEFVVQLNKWVIEVKRHF--V---QELDILQKLEFVDWIQKLGLANHFEREIDEFLETIFVS 98 6*******999999.......66788889999888999999..4...569*********************************** PP -------------------------------.----------------------------------------------------- CS Terpene_synth_N-terminal 86 weekkseeeeddletvAlaFrLLRqhGydvs.sdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhL 169 ++ ++ + +++++ Al+F+LLRqhGy+v sd++++F d + +++s+++k++++L eAshl++e+e iL++a+ F+++ L XP_003621227.1 99 VQNFNKISVQQNMHVSALCFKLLRQHGYNVFpSDILSNFLDVMD---NKFSSNAKDIIELLEASHLGLEDEIILDDAKIFAKNWL 180 99988888888******************96379******9887...567899******************************** PP -------------.---------- CS Terpene_synth_N-terminal 170 keslseelsdesp.nlaeeVehaL 192 k+ + + + ++ ++ e+V haL XP_003621227.1 181 KDAFISYS---INiKVVERVVHAL 201 98554332...3335999999998 PP >> XP_003596564.2 terpene synthase family, metal-binding domain protein [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 102.9 4.2 5.8e-32 5.6e-29 26 191 .. 1 138 [. 1 139 [. 0.87 Alignments for each domain: == domain 1 score: 102.9 bits; conditional E-value: 5.8e-32 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 26 leeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrsweekkseeeeddletvAlaFrLLRq 110 ++++a+ ke+vrk+++++ +++++++L++id+LqrLGisyhFe eI+e+L++i+++ +++k XP_003596564.2 1 MKKQAQMQKEDVRKIFQSS----SSNISQQLNFIDSLQRLGISYHFELEIDEALEQIHNTFTNNK-------------------- 61 56788889********744....48999******************************9988733.................... PP --------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 111 hGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLkeslseelsdespnlaeeVeha 191 +d+Fk Fk + g+f+e+ sedv+g+ sLYe +hl ++ge+iL+eal+Ft hL+++ s+++ s+ l +V++ XP_003596564.2 62 -EITTEEDIFKIFKSNRGSFDEKVSEDVQGMWSLYETAHLKIHGEDILDEALDFTYAHLNSKTSNQM---STFLDAKVRQC 138 .345689****************************************************66666553...33577777765 PP >> XP_013460520.1 (3S)-linalool/(E)-nerolidol/(E,E)-geranyl linalool synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 108.6 0.6 1e-33 9.7e-31 38 185 .. 17 160 .. 3 167 .. 0.82 Alignments for each domain: == domain 1 score: 108.6 bits; conditional E-value: 1e-33 -----------------------------------------------------------..------------------------ CS Terpene_synth_N-terminal 38 rkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrsweekkseeeed..dletvAlaFrLLRqhGydvssdvF 120 +kl+ + +d e lid +qr+Gi+++F eeIk +L++++ + +++ s + ++ ++++vAlaFrLLRq G++v+ d F XP_013460520.1 17 KKLV------KIEDPMESFYLIDIIQRFGIEHYFAEEIKVALEKLHLTLNTN-SIDFASshEIYEVALAFRLLRQGGHYVNADLF 94 3444......2256668999**************************998885.45554457************************ PP --------------------------------------------------------------.--- CS Terpene_synth_N-terminal 121 kkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLkeslseelsdesp.nla 185 + k ++ +ke++ edvkgl+ LYeAs+ls+ege+ L+++ +r++L+ ls++++++ ++a XP_013460520.1 95 DSLKWNKRMLKEKHGEDVKGLIALYEASQLSIEGEDSLNDVGYLCRELLHGWLSRNQEHNEAiHVA 160 ********9999888**********************************88666554332222344 PP >> XP_013464203.1 monoterpene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 102.3 4.3 8.5e-32 8.2e-29 1 192 [] 62 219 .. 62 219 .. 0.84 2 ? -1.7 0.0 6.4 6.2e+03 103 117 .. 373 387 .. 352 389 .. 0.90 Alignments for each domain: == domain 1 score: 102.3 bits; conditional E-value: 8.5e-32 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrs 85 +w++++++sl++++ ++ +++++ lke+vr++l+ +++++ +Lelid LqrLG+syhF++eI++iLd+iy++ XP_013464203.1 62 IWTYDYIQSLSSEY-------KEVMYRKQCSILKEKVRMMLN-----KTENELTQLELIDVLQRLGVSYHFNNEIRDILDNIYNK 134 69999999999999.......67889999999*********5.....236788******************************99 PP ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 86 weekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLk 170 ++ k +++l+++A +d +++Fk +g+f dv+g+lsLYeAs +e+e iL+ea++ t+k+Lk XP_013464203.1 135 QTFKL----KKNLHATAHVIVC--------FEDEICNFK--NGHF-----VDVEGMLSLYEASFHLFEDEPILDEARDVTSKFLK 200 76632....3389999854433........356677776..4544.....79********************************9 PP ---------------------- CS Terpene_synth_N-terminal 171 eslseelsdespnlaeeVehaL 192 e l+++ d +n++ +++haL XP_013464203.1 201 EFLDKNG-D--KNISLQISHAL 219 9999775.2..369999*9998 PP == domain 2 score: -1.7 bits; conditional E-value: 6.4 --------------- CS Terpene_synth_N-terminal 103 laFrLLRqhGydvss 117 laF L++ Gy++++ XP_013464203.1 373 LAFETLKKCGYHITP 387 79**********976 PP >> XP_013460519.1 (3S)-linalool/(E)-nerolidol/(E,E)-geranyl linalool synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 107.8 0.5 1.7e-33 1.7e-30 38 185 .. 17 160 .. 3 167 .. 0.81 Alignments for each domain: == domain 1 score: 107.8 bits; conditional E-value: 1.7e-33 ----------------------------------------------------.-------..----------------------- CS Terpene_synth_N-terminal 38 rkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrsweek.kseeeed..dletvAlaFrLLRqhGydvssdv 119 +kl+ + +d e lid +qr+Gi+++F+eeIk +L++++ +++ + + +l++vAlaFrLLRq G++v+ d XP_013460519.1 17 KKLV------KIEDPMESFYLIDIIQRFGIEHYFTEEIKVALEKLHLILNNNpI--DFVSshELYEVALAFRLLRQGGHYVNADL 93 4444......2256668999**************************98888653..222245*********************** PP ---------------------------------------------------------------.--- CS Terpene_synth_N-terminal 120 FkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLkeslseelsdesp.nla 185 F+ k ++ +ke++ e+vkgl+ LYeAs+ls+ege+ L+++ +r++L+ ls++++++ ++a XP_013460519.1 94 FDSLKWNKRMLKEKHGEEVKGLITLYEASQLSIEGEDSLNDVGYLCRELLHGWLSRNQEHNEAiHVA 160 *********9999888**********************************88666554332222344 PP >> XP_013464202.1 monoterpene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 101.5 4.3 1.5e-31 1.5e-28 1 192 [] 62 219 .. 62 219 .. 0.84 2 ? -2.1 0.0 8.8 8.4e+03 103 117 .. 373 387 .. 357 391 .. 0.90 Alignments for each domain: == domain 1 score: 101.5 bits; conditional E-value: 1.5e-31 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrs 85 +w++++++sl++++ ++ +++++ lke+vr++l+ +++++ +Lelid LqrLG+syhF++eI++iLd+iy++ XP_013464202.1 62 IWTYDYIQSLSSEY-------KEVMYRKQCSILKEKVRMMLN-----KTENELTQLELIDVLQRLGVSYHFNNEIRDILDNIYNK 134 69999999999999.......67889999999*********5.....236788******************************99 PP ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 86 weekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLk 170 ++ k +++l+++A +d +++Fk +g+f dv+g+lsLYeAs +e+e iL+ea++ t+k+Lk XP_013464202.1 135 QTFKL----KKNLHATAHVIVC--------FEDEICNFK--NGHF-----VDVEGMLSLYEASFHLFEDEPILDEARDVTSKFLK 200 76632....3389999854433........356677776..4544.....79********************************9 PP ---------------------- CS Terpene_synth_N-terminal 171 eslseelsdespnlaeeVehaL 192 e l+++ d +n++ +++haL XP_013464202.1 201 EFLDKNG-D--KNISLQISHAL 219 9999775.2..369999*9998 PP == domain 2 score: -2.1 bits; conditional E-value: 8.8 --------------- CS Terpene_synth_N-terminal 103 laFrLLRqhGydvss 117 laF L++ Gy++++ XP_013464202.1 373 LAFETLKKCGYHITP 387 79**********986 PP >> XP_013460327.1 (3S)-linalool/(E)-nerolidol/(E,E)-geranyl linalool synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 106.3 0.6 5.2e-33 5e-30 48 179 .. 24 153 .. 3 167 .. 0.82 Alignments for each domain: == domain 1 score: 106.3 bits; conditional E-value: 5.2e-33 -------------------------------------------------..---------------------------------- CS Terpene_synth_N-terminal 48 ypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrsweekkseeeed..dletvAlaFrLLRqhGydvssdvFkkFkdeegnf 130 yp e lid +qrL i+++F eeIk +L+++y+ +++ ++ + +l++vAlaFrLLRq G++v+ d F+ k ++ f XP_013460327.1 24 YP---MESFYLIDIIQRLNIEHYFVEEIKVALEKLYSILNTN-PNDFMSihELYEVALAFRLLRQGGHYVNADLFDSLKCNKRMF 104 22...36689**************************988775.33444478********************************** PP ------------------------------------------------- CS Terpene_synth_N-terminal 131 keslsedvkgllsLYeAshlstegeeiLeealsFtrkhLkeslseelsd 179 +e++ edvkgl+ LYeAs+ls+ege+ L++ +r++L+ ls+++++ XP_013460327.1 105 EEKHGEDVKGLVALYEASQLSIEGEDSLNDLGYVCRELLHGWLSRHQEH 153 99888**********************************8766655432 PP >> XP_013460518.1 (3S)-linalool/(E)-nerolidol/(E,E)-geranyl linalool synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 105.4 1.3 9.8e-33 9.4e-30 38 181 .. 17 154 .. 3 166 .. 0.82 Alignments for each domain: == domain 1 score: 105.4 bits; conditional E-value: 9.8e-33 ----------------------------------------------------.-------..----------------------- CS Terpene_synth_N-terminal 38 rkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrsweek.kseeeed..dletvAlaFrLLRqhGydvssdv 119 +kl+ + +d+ e lid +qr+Gi+++F eeIk +L++++ +++ + + +l++ +laFrLLRq G++v+ d XP_013460518.1 17 KKLV------KIEDSMESFYLIDIIQRFGIEHYFAEEIKVALEKLHLILNTNpIDFV--NshELYEFSLAFRLLRQGGHYVNADL 93 4444......22567799****************************98888653333..235*********************** PP -------------------------------------------------------------- CS Terpene_synth_N-terminal 120 FkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLkeslseelsdes 181 F+ k ++ f+e++ ed+kgl+ LYeAs+ls+ ge+ L+++ +r++L++ ls+++++ + XP_013460518.1 94 FDSLKCNKRMFEEKHGEDLKGLIALYEASQLSIDGEDSLNDVGYLCRELLHNWLSRNQEH-N 154 ***********99888**********************************9966655422.2 PP >> XP_003600104.2 (3S)-linalool/(E)-nerolidol/(E,E)-geranyl linalool synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 100.7 0.1 2.6e-31 2.5e-28 35 176 .. 13 150 .. 2 164 .. 0.82 Alignments for each domain: == domain 1 score: 100.7 bits; conditional E-value: 2.6e-31 -------------------------------------------------------.-------..-------------------- CS Terpene_synth_N-terminal 35 eevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrsweek.kseeeed..dletvAlaFrLLRqhGydvs 116 ++v+k l v ++d e+ +lid +qrLGi+++F eeIk +L++ + +++ + + +l++vAlaFrLLRq Gy+v+ XP_003600104.2 13 KQVHKKL-----VTSEDPTENFHLIDIIQRLGIEHYFVEEIKVALEKQFLILSSNpIDFV--SshELYEVALAFRLLRQGGYYVN 90 3444444.....23478889***************************9988887653222..235******************** PP ------------------------------------------------------------ CS Terpene_synth_N-terminal 117 sdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLkeslsee 176 + F+ k ++++++ + edvkgl+ LYeAs+ls+ege+ L++ + ++L+ l ++ XP_003600104.2 91 AELFDCLKCSKKSLRVKYGEDVKGLIALYEASQLSIEGEDGLNDLGYLSCELLQAWLPRH 150 **************99999****************************9999996554433 PP >> XP_013460516.1 (3S)-linalool/(E)-nerolidol/(E,E)-geranyl linalool synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 98.7 0.4 1.1e-30 1.1e-27 57 178 .. 5 128 .. 1 143 [. 0.86 Alignments for each domain: == domain 1 score: 98.7 bits; conditional E-value: 1.1e-30 ---------------------------------..-------..----------------------------------------- CS Terpene_synth_N-terminal 57 elidtLqrLGisyhFeeeIkeiLdeiyrsweek..kseeeed..dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsed 137 l d +qr+Gi+++F eeIk +L++++ +++ + + +l++vAlaFrLLRq G++v+ d F+ k ++ f+e++ ed XP_013460516.1 5 YLMDIIQRFGIEHYFAEEIKVALENLHLILNTNpiI--DFVSshELYEVALAFRLLRQGGHYVNADLFDSLKCNKRMFEEKHGED 87 689************************998887642..333346**********************************99888** PP ----------------------------------------- CS Terpene_synth_N-terminal 138 vkgllsLYeAshlstegeeiLeealsFtrkhLkeslseels 178 vkgl+ LYeAs+ls+ege+ L+++ + ++L+ ls++++ XP_013460516.1 88 VKGLIALYEASQLSIEGEDSLNDVGYLCCELLHAWLSRNQE 128 ********************************886665542 PP >> XP_003619707.1 (3S)-linalool/(E)-nerolidol/(E,E)-geranyl linalool synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 96.3 0.9 6.1e-30 5.9e-27 50 180 .. 23 153 .. 4 165 .. 0.82 Alignments for each domain: == domain 1 score: 96.3 bits; conditional E-value: 6.1e-30 ----------------------------------------.-------..----------------------------------- CS Terpene_synth_N-terminal 50 kdleekLelidtLqrLGisyhFeeeIkeiLdeiyrsweek.kseeeed..dletvAlaFrLLRqhGydvssdvFkkFkdeegnfk 131 +d e lid +q++ i+++F +eIk++L++++ +++ + + +l++vAlaFrLLRq G++v+ d F+ k ++ f+ XP_003619707.1 23 EDPMECFYLIDIIQKFDIEHYFVDEIKAALENLHLILNTNpI--DFVSshELYQVALAFRLLRQGGHYVNADLFDSLKCNKRMFE 105 44557788**************************88887653..222245**********************************9 PP ------------------------------------------------- CS Terpene_synth_N-terminal 132 eslsedvkgllsLYeAshlstegeeiLeealsFtrkhLkeslseelsde 180 e++ edvkgl+ LYeAs+ls+ege+ L+++ + ++L+ ls++++ + XP_003619707.1 106 ETHGEDVKGLIALYEASQLSIEGEDHLNDVGYLCCELLHAWLSRNQE-H 153 9888**********************************886665542.2 PP >> XP_003629125.2 amino-terminal domain terpene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 53.3 0.2 9.2e-17 8.8e-14 119 192 .] 35 114 .. 32 114 .. 0.83 Alignments for each domain: == domain 1 score: 53.3 bits; conditional E-value: 9.2e-17 -------------------....----------------------------------.------.--.---.---------- CS Terpene_synth_N-terminal 119 vFkkFkdeegnfkeslsed....vkgllsLYeAshlstegeeiLeealsFtrkhLke.slseel.sd.esp.nlaeeVehaL 192 vFk+F++ +g+f ++++ + v g+++LY+As++ +++e+iLe+a+sF++k+L++ ++++el ++ +++ +l+ eV +aL XP_003629125.2 35 VFKHFEK-NGEF-FCFAGQlnqaVMGMFNLYRASQVLFQEENILEDAKSFSSKYLTKkRVANELlDKwIITkDLSGEVGYAL 114 9****95.6656.5555434556********************************998888888555866669*****9998 PP >> XP_003618358.2 sesquiterpene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 46.3 0.5 1.2e-14 1.2e-11 141 192 .] 1 48 [. 1 48 [. 0.92 Alignments for each domain: == domain 1 score: 46.3 bits; conditional E-value: 1.2e-14 ---------------------------------------------------- CS Terpene_synth_N-terminal 141 llsLYeAshlstegeeiLeealsFtrkhLkeslseelsdespnlaeeVehaL 192 +lsLYeAsh++++geeiLe+al+Ft++hL es+ ++l sp la +V+h+L XP_003618358.2 1 MLSLYEASHMMVHGEEILEKALAFTSTHL-ESIVTQL---SPFLAAQVKHSL 48 9****************************.8888775...567*******97 PP >> XP_003619712.1 (3S)-linalool/(E)-nerolidol/(E,E)-geranyl linalool synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.6 0.0 1.4e-08 1.3e-05 130 178 .. 2 50 .. 1 63 [. 0.79 Alignments for each domain: == domain 1 score: 26.6 bits; conditional E-value: 1.4e-08 ------------------------------------------------- CS Terpene_synth_N-terminal 130 fkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLkeslseels 178 f+e++ edvkgl+ LYeAs+ls+ege+ L+++ + ++L+ ls++++ XP_003619712.1 2 FEEKHGEDVKGLIALYEASQLSIEGEDHLNDVGYLCWELLHAWLSRNQE 50 6666669*********************************886665542 PP >> XP_003616556.1 amino-terminal domain terpene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 25.2 0.1 3.7e-08 3.6e-05 147 192 .] 16 57 .. 14 57 .. 0.83 Alignments for each domain: == domain 1 score: 25.2 bits; conditional E-value: 3.7e-08 ---------------------------------------------- CS Terpene_synth_N-terminal 147 AshlstegeeiLeealsFtrkhLkeslseelsdespnlaeeVehaL 192 A+ ls+ege+iL+ea++Ft+ hLk+ lse + s+ l ++V+h+L XP_003616556.1 16 ATFLSYEGEQILDEANAFTSMHLKD-LSEGR---SSILIDQVNHSL 57 899********************55.55443...224999999987 PP >> XP_003608432.1 amino-terminal domain terpene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.8 0.2 1e-07 9.8e-05 64 112 .. 103 149 .. 72 151 .. 0.86 Alignments for each domain: == domain 1 score: 23.8 bits; conditional E-value: 1e-07 ------------------------------------------------- CS Terpene_synth_N-terminal 64 rLGisyhFeeeIkeiLdeiyrsweekkseeeeddletvAlaFrLLRqhG 112 L i+y+Fe+eI+++ + + r + +k ++ + l +vA +Fr+LRq+ XP_003608432.1 103 ELSIEYQFEQEIEATFEAMLRFNGIQK--NKYEGLSQVAFQFRMLRQKS 149 599*****************9977644..33359*************86 PP >> XP_003617702.2 (E)-beta-caryophyllene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.5 0.0 1.2e-07 0.00012 151 192 .] 1 40 [. 1 40 [. 0.82 Alignments for each domain: == domain 1 score: 23.5 bits; conditional E-value: 1.2e-07 ------------------------------------------ CS Terpene_synth_N-terminal 151 stegeeiLeealsFtrkhLkeslseelsdespnlaeeVehaL 192 +++ge+iLeeal Ft++hL es++++l++ + a +V+h L XP_003617702.2 1 MVHGEDILEEALVFTTTHL-ESITKQLNHPH-PQALQVKHCL 40 68*****************.98998875433.4788999876 PP >> XP_003621226.1 amino-terminal domain terpene synthase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 20.9 0.1 7.6e-07 0.00073 118 165 .. 40 84 .. 37 85 .. 0.89 Alignments for each domain: == domain 1 score: 20.9 bits; conditional E-value: 7.6e-07 ------------------------------------------------ CS Terpene_synth_N-terminal 118 dvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFt 165 d++++F d + +++s+d+k ++L eAshl++e+e+iL+ a+ F+ XP_003621226.1 40 DILSNFLDVID---NRFSSDAKYFIELVEASHLGLEDEKILDVAKMFA 84 78889998666...67889**************************997 PP >> XP_013443092.1 Ent-copalyl diphosphate synthase-like protein [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.1 0.0 0.00038 0.37 153 176 .. 36 60 .. 7 73 .. 0.80 2 ? -1.0 0.0 4 3.8e+03 24 42 .. 129 146 .. 114 168 .. 0.69 Alignments for each domain: == domain 1 score: 12.1 bits; conditional E-value: 0.00038 -------------------.----- CS Terpene_synth_N-terminal 153 egeeiLeealsFtrkhLke.slsee 176 +e+iLe+a++F+ k+Lk+ ++++e XP_013443092.1 36 FQEKILEDAKNFSAKYLKKkRAANE 60 4799*************99444444 PP == domain 2 score: -1.0 bits; conditional E-value: 4 ------------------- CS Terpene_synth_N-terminal 24 ealeeeaeklkeevrkllk 42 ++ + + ++ kee++++++ XP_013443092.1 129 CQAM-HYDEWKEEIQSIFE 146 4455.77788888888885 PP >> XP_013448877.1 haloacid dehalogenase-like hydrolase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -2.1 0.0 8.8 8.5e+03 62 84 .. 46 68 .. 44 87 .. 0.76 2 ? 11.7 0.0 0.00051 0.49 53 101 .. 122 167 .. 98 195 .. 0.76 Alignments for each domain: == domain 1 score: -2.1 bits; conditional E-value: 8.8 ----------------------- CS Terpene_synth_N-terminal 62 LqrLGisyhFeeeIkeiLdeiyr 84 +++LGi++ ++ ++ L + y XP_013448877.1 46 VEKLGIDRSIIDDLSNHLYKNYG 68 78999999888887777766665 PP == domain 2 score: 11.7 bits; conditional E-value: 0.00051 ------------------------.------------------------- CS Terpene_synth_N-terminal 53 eekLelidtLqrLGisyhFeeeIk.eiLdeiyrsweekkseeeeddletv 101 +k++ i++L rLG++ Fe I e+L+ i+++ +++ edd+e v XP_013448877.1 122 ADKVHAIKALSRLGLEDCFEGVICfETLNPIHKNSVSDD----EDDIEFV 167 4799*****************99559******9987743....2344443 PP >> XP_013448876.1 haloacid dehalogenase-like hydrolase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.1 0.0 0.00078 0.75 53 100 .. 122 166 .. 99 194 .. 0.76 Alignments for each domain: == domain 1 score: 11.1 bits; conditional E-value: 0.00078 ------------------------.------------------------ CS Terpene_synth_N-terminal 53 eekLelidtLqrLGisyhFeeeIk.eiLdeiyrsweekkseeeeddlet 100 +k++ i++L rLG++ Fe I e+L+ i+++ +++ edd+e XP_013448876.1 122 ADKVHAIKALSRLGLEDCFEGVICfETLNPIHKNSVSDD----EDDIEF 166 4799*****************99559******9987743....235444 PP >> XP_013455013.1 haloacid dehalogenase-like hydrolase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.6 0.0 0.0011 1 53 99 .. 123 166 .. 98 175 .. 0.81 Alignments for each domain: == domain 1 score: 10.6 bits; conditional E-value: 0.0011 ------------------------.----------------------- CS Terpene_synth_N-terminal 53 eekLelidtLqrLGisyhFeeeIk.eiLdeiyrsweekkseeeeddle 99 +k++ +++L rLG++ Fe I e+L+ i+++ +++ edd+e XP_013455013.1 123 ADKVHAVKALSRLGLEDCFEGIICfETLNPIHKNSVSDD----EDDIE 166 4799*****************99559******9977743....23554 PP >> XP_013455014.1 haloacid dehalogenase-like hydrolase [Medicago truncatula] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.4 0.0 0.0013 1.2 53 99 .. 78 121 .. 54 130 .. 0.81 Alignments for each domain: == domain 1 score: 10.4 bits; conditional E-value: 0.0013 ------------------------.----------------------- CS Terpene_synth_N-terminal 53 eekLelidtLqrLGisyhFeeeIk.eiLdeiyrsweekkseeeeddle 99 +k++ +++L rLG++ Fe I e+L+ i+++ +++ edd+e XP_013455014.1 78 ADKVHAVKALSRLGLEDCFEGIICfETLNPIHKNSVSDD----EDDIE 121 4799*****************99559******9977743....23554 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (192 nodes) Target sequences: 57661 (19895416 residues) Passed MSV filter: 2640 (0.0457848); expected 1153.2 (0.02) Passed bias filter: 1395 (0.0241931); expected 1153.2 (0.02) Passed Vit filter: 156 (0.00270547); expected 57.7 (0.001) Passed Fwd filter: 60 (0.00104056); expected 0.6 (1e-05) Initial search space (Z): 57661 [actual number of targets] Domain search space (domZ): 60 [number of targets reported over threshold] # CPU time: 1.03u 0.00s 00:00:01.03 Elapsed: 00:00:00.19 # Mc/sec: 19489.39 //